SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 10)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10131884	0.82[CHB][hapmap];0.92[CHD][hapmap];0.85[JPT][hapmap]
rs10131990	0.82[CHB][hapmap];0.86[JPT][hapmap]
rs10140733	0.82[CHB][hapmap];1.00[CHD][hapmap];0.86[JPT][hapmap]
rs10146550	1.00[JPT][hapmap]
rs11844904	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs17104480	0.85[JPT][hapmap]
rs17104482	0.86[JPT][hapmap]
rs3742876	0.82[CHB][hapmap];0.86[JPT][hapmap];0.80[ASN][1000 genomes]
rs7157923	1.00[JPT][hapmap]
rs7359109	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
VTI1B	Proximal transcriptional regulation
ARG2	Distal transcriptional regulation
RDH11	Distal transcriptional regulation
ATP6V1D	Distal transcriptional regulation
EIF2S1	Distal transcriptional regulation
PIGH	Distal transcriptional regulation
RNA5SP386	Distal transcriptional regulation
VTI1B	Distal transcriptional regulation
ENSG00000258466	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)