SNP Report
Basic Infomation
| Name | rs35164067 dbSNP |
|---|---|
| Location | chr:19,10525181 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 15)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11085730 | 0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs11669299 | 0.92[EUR][1000 genomes];0.85[ASN][1000 genomes] |
| rs11670704 | 0.81[EUR][1000 genomes];0.88[ASN][1000 genomes] |
| rs11878501 | 0.83[ASN][1000 genomes] |
| rs11879191 | 0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs11880990 | 0.93[ASN][1000 genomes] |
| rs12982179 | 0.95[ASN][1000 genomes] |
| rs12983921 | 0.82[AFR][1000 genomes];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes] |
| rs34266232 | 0.81[ASN][1000 genomes] |
| rs34681319 | 0.84[ASN][1000 genomes] |
| rs34953890 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes] |
| rs35615354 | 0.85[ASN][1000 genomes] |
| rs3760650 | 0.84[ASN][1000 genomes] |
| rs8112449 | 0.88[ASN][1000 genomes] |
| rs9807913 | 0.80[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| PDE4A | Proximal transcriptional regulation |
| CDC37 | Distal transcriptional regulation |
| MIR1181 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014