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rVarBase
SNP Report
Basic Infomation
Name
rs34230978  
dbSNP
Location
chr:2,61221523
Allele
A/T
LD-proxy of rSNPs(r
2
>0.8) (count: 6)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10496090
0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12470271
0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12996153
1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs35230012
0.85[EUR][1000 genomes]
rs35852308
1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62150966
0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
RNA5SP95
Proximal transcriptional regulation
PUS10
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)