SNP Report

Basic Infomation

Name	rs296513 dbSNP
Location	chr:1,200906473
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11580144	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs167199	0.90[CEU][hapmap]
rs296519	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs296542	0.90[CEU][hapmap]
rs296561	0.90[CEU][hapmap]
rs296564	0.88[CEU][hapmap]
rs296565	0.90[CEU][hapmap]
rs296566	0.90[CEU][hapmap]
rs296569	0.90[CEU][hapmap]
rs296571	0.90[CEU][hapmap]
rs6692762	0.88[EUR][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 2)