SNP Report

Basic Infomation

Name	rs2901505 dbSNP
Location	chr:10,93501469
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 27)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10509634	0.88[CEU][hapmap];0.96[CHB][hapmap];0.95[JPT][hapmap];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10509636	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs10786014	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10881958	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10881960	0.98[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10881966	0.88[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10881967	0.88[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10881969	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10881971	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10881989	0.81[CEU][hapmap]
rs11186697	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12221087	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12412538	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12782935	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1341263	0.88[CEU][hapmap];0.80[EUR][1000 genomes]
rs1417254	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1539040	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1592050	1.00[CHB][hapmap];0.95[JPT][hapmap];0.90[YRI][hapmap];0.95[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs1935029	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2066275	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2153654	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3758499	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs61874731	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7082350	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7897499	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7913999	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7919141	0.92[CEU][hapmap];0.81[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
HECTD2	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)