SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs28720241	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28720242	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28720245	1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28720253	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28720263	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28720288	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28720320	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28891995	1.00[EUR][1000 genomes]
rs57265354	1.00[EUR][1000 genomes]
rs7120780	1.00[TSI][hapmap]
rs73492389	1.00[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
VWCE	Proximal transcriptional regulation
ENSG00000256591	Distal transcriptional regulation
CPSF7	Distal transcriptional regulation
SDHAF2	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)