SNP Report
Basic Infomation
| Name | rs28370780 dbSNP |
|---|---|
| Location | chr:12,40412820 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 30)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs17489225 | 1.00[AMR][1000 genomes] |
| rs17489302 | 1.00[AMR][1000 genomes] |
| rs17489379 | 1.00[AMR][1000 genomes] |
| rs17489666 | 1.00[AMR][1000 genomes] |
| rs17489889 | 1.00[AMR][1000 genomes] |
| rs17490418 | 1.00[AMR][1000 genomes] |
| rs17490578 | 1.00[AMR][1000 genomes] |
| rs17490599 | 1.00[AMR][1000 genomes] |
| rs17490620 | 1.00[AMR][1000 genomes] |
| rs17518014 | 1.00[YRI][hapmap];1.00[AMR][1000 genomes] |
| rs17518050 | 1.00[AMR][1000 genomes] |
| rs17518071 | 1.00[AMR][1000 genomes] |
| rs17518204 | 1.00[AMR][1000 genomes] |
| rs17518253 | 1.00[AMR][1000 genomes] |
| rs17518273 | 1.00[AMR][1000 genomes] |
| rs17518364 | 1.00[AMR][1000 genomes] |
| rs17518805 | 1.00[AMR][1000 genomes] |
| rs28370688 | 1.00[AMR][1000 genomes] |
| rs28370745 | 1.00[AMR][1000 genomes] |
| rs28370748 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs28370755 | 1.00[AMR][1000 genomes] |
| rs28370758 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs28370768 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs28370776 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs28370777 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs28370778 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs28370783 | 1.00[AMR][1000 genomes] |
| rs28370786 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs7306747 | 1.00[AMR][1000 genomes] |
| rs7307258 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| SLC2A13 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014