SNP Report

Basic Infomation

Name	rs2745932 dbSNP
Location	chr:6,20753750
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 57)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10806924	0.88[ASN][1000 genomes]
rs10806925	0.81[ASN][1000 genomes]
rs10946412	0.82[ASN][1000 genomes]
rs11968853	0.86[ASN][1000 genomes]
rs12111182	0.88[ASN][1000 genomes]
rs12213956	0.82[ASN][1000 genomes]
rs12661606	0.85[ASN][1000 genomes]
rs2745933	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2819993	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2819997	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2820000	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4330530	0.84[ASN][1000 genomes]
rs4373348	0.86[ASN][1000 genomes]
rs4478387	0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4585542	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4712545	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4712549	0.89[ASN][1000 genomes]
rs4712552	0.82[ASN][1000 genomes]
rs4712553	0.82[ASN][1000 genomes]
rs4712555	0.82[ASN][1000 genomes]
rs62399349	0.85[ASN][1000 genomes]
rs6902880	0.86[ASN][1000 genomes]
rs6923264	0.82[ASN][1000 genomes]
rs6926436	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6936300	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6936840	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6938757	0.82[ASN][1000 genomes]
rs6941727	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7747989	0.84[ASN][1000 genomes]
rs7750031	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7751154	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7752140	0.85[ASN][1000 genomes]
rs7752310	0.85[ASN][1000 genomes]
rs7772390	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9348443	0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9348444	0.86[ASN][1000 genomes]
rs9348445	0.86[ASN][1000 genomes]
rs9350280	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9350281	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9356752	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9358366	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9368232	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9460558	0.89[ASN][1000 genomes]
rs9460559	0.85[ASN][1000 genomes]
rs9465884	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9465886	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9465891	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9465897	0.86[ASN][1000 genomes]
rs9465898	0.85[ASN][1000 genomes]
rs9465899	0.84[ASN][1000 genomes]
rs9465900	0.85[ASN][1000 genomes]
rs9465902	0.82[ASN][1000 genomes]
rs9465904	0.82[ASN][1000 genomes]
rs9465905	0.82[ASN][1000 genomes]
rs9465906	0.82[ASN][1000 genomes]
rs9465907	0.82[ASN][1000 genomes]
rs9465909	0.82[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)