Home
Search
List search
Advanced Search
Data content
Tutorial
About Us
Feedback
rVarBase
SNP Report
Basic Infomation
Name
rs2743345  
dbSNP
Location
chr:20,43947150
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 6)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs2233093
0.89[EUR][1000 genomes]
rs2741502
0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2743221
0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2743317
0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6032104
0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs736389
0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
RBPJL
Distal transcriptional regulation
MATN4
Distal transcriptional regulation
PIGT
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)