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rVarBase
SNP Report
Basic Infomation
Name
rs2513082  
dbSNP
Location
chr:11,62090509
Allele
T/A
LD-proxy of rSNPs(r
2
>0.8) (count: 13)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs12275541
1.00[ASN][1000 genomes]
rs1534589
0.98[ASN][1000 genomes]
rs17157147
0.98[ASN][1000 genomes]
rs1969544
0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2463823
0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2463826
0.96[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2513055
0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2513740
0.95[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2513741
0.84[EUR][1000 genomes]
rs2513748
0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs35105438
0.86[EUR][1000 genomes]
rs4309171
0.98[ASN][1000 genomes]
rs55906750
0.98[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
ENSG00000255213
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)