SNP Report
Basic Infomation
| Name | rs1969544 dbSNP |
|---|---|
| Location | chr:11,62095933 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 41)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10501332 | 0.90[ASN][1000 genomes] |
| rs11231044 | 0.82[ASN][1000 genomes] |
| rs12270299 | 0.93[ASN][1000 genomes] |
| rs12278088 | 0.93[ASN][1000 genomes] |
| rs12281053 | 0.93[ASN][1000 genomes] |
| rs12283977 | 0.95[ASN][1000 genomes] |
| rs12284476 | 0.93[ASN][1000 genomes] |
| rs12284539 | 0.89[ASN][1000 genomes] |
| rs12286415 | 0.95[ASN][1000 genomes] |
| rs12419894 | 0.82[ASN][1000 genomes] |
| rs12420825 | 0.90[ASN][1000 genomes] |
| rs13377409 | 0.93[ASN][1000 genomes] |
| rs17585235 | 0.95[ASN][1000 genomes] |
| rs17585270 | 0.95[ASN][1000 genomes] |
| rs2277281 | 0.86[ASN][1000 genomes] |
| rs2463823 | 0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs2463826 | 0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes] |
| rs2513055 | 0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes] |
| rs2513082 | 0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes] |
| rs2513740 | 0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes] |
| rs2513741 | 0.81[EUR][1000 genomes] |
| rs2513748 | 0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs35015521 | 0.90[ASN][1000 genomes] |
| rs35105438 | 0.83[EUR][1000 genomes] |
| rs3741245 | 0.88[ASN][1000 genomes] |
| rs4963295 | 0.93[ASN][1000 genomes] |
| rs4963296 | 0.94[ASN][1000 genomes] |
| rs4963297 | 0.91[ASN][1000 genomes] |
| rs4963298 | 0.83[ASN][1000 genomes] |
| rs4963497 | 0.92[ASN][1000 genomes] |
| rs4963498 | 0.92[ASN][1000 genomes] |
| rs4963499 | 0.94[ASN][1000 genomes] |
| rs4963500 | 0.92[ASN][1000 genomes] |
| rs4963501 | 0.94[ASN][1000 genomes] |
| rs4963502 | 0.93[ASN][1000 genomes] |
| rs55676140 | 0.93[ASN][1000 genomes] |
| rs56142004 | 0.90[ASN][1000 genomes] |
| rs7118241 | 0.95[ASN][1000 genomes] |
| rs7128883 | 0.95[ASN][1000 genomes] |
| rs7130122 | 0.95[ASN][1000 genomes] |
| rs7928732 | 0.90[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ENSG00000255213 | Proximal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014