SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs17132144	1.00[CEU][hapmap]
rs17132283	0.89[MKK][hapmap];1.00[YRI][hapmap]
rs17132318	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs17165633	1.00[CEU][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs181781	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[GIH][hapmap];0.91[JPT][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2073506	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs2074808	0.91[GIH][hapmap];0.91[JPT][hapmap]
rs3749753	0.84[CEU][hapmap]
rs657075	1.00[CEU][hapmap];0.91[GIH][hapmap];1.00[MEX][hapmap];0.89[TSI][hapmap];0.91[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
RNA5SP192	Distal transcriptional regulation
ENSG00000235775	Distal transcriptional regulation
ENSG00000233006	Distal transcriptional regulation
MIR3936	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 2)

eQTL related gene	Source
PEX5L	SCAN
P4HA2	seeQTL