SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 28)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1061986	0.83[EUR][1000 genomes]
rs1107654	0.83[EUR][1000 genomes]
rs2054905	0.83[EUR][1000 genomes]
rs2409003	0.91[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2409004	0.91[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2450994	0.93[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2468949	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2634676	0.83[EUR][1000 genomes]
rs2634678	0.83[EUR][1000 genomes]
rs2634680	0.83[EUR][1000 genomes]
rs2634681	0.84[EUR][1000 genomes]
rs2634682	0.84[EUR][1000 genomes]
rs2634684	0.84[EUR][1000 genomes]
rs2634686	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2634688	0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2634689	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2732441	0.88[EUR][1000 genomes]
rs2732448	0.83[EUR][1000 genomes]
rs2732453	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2732454	0.93[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2732461	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2732462	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2732466	0.84[EUR][1000 genomes]
rs2732479	0.83[EUR][1000 genomes]
rs2732481	0.83[EUR][1000 genomes]
rs2732484	0.83[EUR][1000 genomes]
rs2732486	0.83[EUR][1000 genomes]
rs923397	0.93[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
H1FNT	Proximal transcriptional regulation
ZNF641	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)