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rVarBase
SNP Report
Basic Infomation
Name
rs2343551  
dbSNP
Location
chr:10,82267945
Allele
A/C
LD-proxy of rSNPs(r
2
>0.8) (count: 12)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs1870137
0.90[AMR][1000 genomes]
rs1870138
0.90[AMR][1000 genomes]
rs1878036
0.88[AMR][1000 genomes]
rs1902660
0.90[AMR][1000 genomes]
rs6586028
0.83[AMR][1000 genomes]
rs7080009
0.90[AMR][1000 genomes]
rs7097656
0.90[AMR][1000 genomes]
rs7896832
0.90[AMR][1000 genomes]
rs7900536
0.90[AMR][1000 genomes]
rs7910643
0.90[AMR][1000 genomes]
rs7922621
0.90[AMR][1000 genomes]
rs9633740
0.90[AMR][1000 genomes]
rSNP related genes
Symbol
Regulation type
TSPAN14
Distal transcriptional regulation
TSPAN14
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)