SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11227112	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.93[EUR][1000 genomes]
rs11539360	0.86[EUR][1000 genomes]
rs11546366	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12099121	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.93[EUR][1000 genomes]
rs12270532	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.93[EUR][1000 genomes]
rs12281324	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.93[EUR][1000 genomes]
rs12281698	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.93[EUR][1000 genomes]
rs12286839	0.93[EUR][1000 genomes]
rs12295393	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.93[EUR][1000 genomes]
rs61736623	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7105558	0.93[EUR][1000 genomes]
rs7105865	0.93[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ARL2	Distal transcriptional regulation
SNX15	Distal transcriptional regulation
SNX15	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)