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rVarBase
SNP Report
Basic Infomation
Name
rs2232635  
dbSNP
Location
chr:1,154966221
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 5)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs12059540
1.00[MEX][hapmap]
rs12064595
1.00[MEX][hapmap]
rs12078687
1.00[MEX][hapmap]
rs12092479
1.00[MEX][hapmap]
rs9236
1.00[MEX][hapmap]
rSNP related genes
Symbol
Regulation type
ADAM15
Distal transcriptional regulation
EFNA3
Distal transcriptional regulation
LENEP
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 1)
eQTL related gene
Source
KCNN3
seeQTL