SNP Report

Basic Infomation

Name	rs2204681 dbSNP
Location	chr:12,40962147
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 30)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10431578	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs11177109	0.84[JPT][hapmap]
rs11177169	0.82[ASN][1000 genomes]
rs11177179	0.86[CHB][hapmap];0.84[JPT][hapmap];0.82[ASN][1000 genomes]
rs11177184	0.82[ASN][1000 genomes]
rs11177260	0.84[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs11561483	0.82[ASN][1000 genomes]
rs11832449	0.86[CHB][hapmap];0.84[JPT][hapmap];0.84[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs11838212	0.86[CHB][hapmap];0.84[JPT][hapmap];0.84[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs12227829	0.82[ASN][1000 genomes]
rs12231820	0.82[ASN][1000 genomes]
rs1463738	0.86[CHB][hapmap];0.84[JPT][hapmap];0.82[ASN][1000 genomes]
rs1492315	0.82[ASN][1000 genomes]
rs1965309	0.82[ASN][1000 genomes]
rs3751167	0.82[ASN][1000 genomes]
rs3751168	0.84[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs3751175	0.84[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs3829294	0.86[CHB][hapmap];0.84[JPT][hapmap];0.82[ASN][1000 genomes]
rs3920440	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs5002282	0.87[CHB][hapmap];0.85[JPT][hapmap];0.84[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs58355196	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs66485183	0.82[ASN][1000 genomes]
rs66518640	0.82[ASN][1000 genomes]
rs7133098	0.87[CHB][hapmap];0.85[JPT][hapmap]
rs7304329	0.86[CHB][hapmap];0.84[JPT][hapmap]
rs7308403	0.82[ASN][1000 genomes]
rs73269994	0.84[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs73271812	0.82[ASN][1000 genomes]
rs7979493	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8181694	0.84[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
MUC19	Proximal transcriptional regulation
MUC19	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)