SNP Report

Basic Infomation

Name	rs2155996 dbSNP
Location	chr:11,62172173
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 65)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1043785	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10501332	0.82[EUR][1000 genomes]
rs10897261	0.82[EUR][1000 genomes]
rs10897269	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11231044	0.82[EUR][1000 genomes]
rs11231055	0.85[EUR][1000 genomes]
rs11231067	0.88[EUR][1000 genomes]
rs11231068	0.88[EUR][1000 genomes]
rs11231070	0.88[EUR][1000 genomes]
rs11231071	0.86[EUR][1000 genomes]
rs11231072	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11231073	0.81[ASN][1000 genomes]
rs11231074	0.83[ASN][1000 genomes]
rs11231075	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11231076	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11820258	0.88[EUR][1000 genomes]
rs11824690	0.86[EUR][1000 genomes]
rs12274086	0.81[EUR][1000 genomes]
rs12278088	0.82[EUR][1000 genomes]
rs12281053	0.81[EUR][1000 genomes]
rs12282077	0.83[EUR][1000 genomes]
rs12283977	0.81[EUR][1000 genomes]
rs12284476	0.82[EUR][1000 genomes]
rs12285902	0.82[EUR][1000 genomes]
rs12286415	0.80[EUR][1000 genomes]
rs12292642	0.88[EUR][1000 genomes]
rs12419894	0.82[EUR][1000 genomes]
rs12420825	0.82[EUR][1000 genomes]
rs17585235	0.81[EUR][1000 genomes]
rs17585270	0.81[EUR][1000 genomes]
rs2277281	0.82[EUR][1000 genomes]
rs2302359	0.89[EUR][1000 genomes]
rs2302361	0.89[EUR][1000 genomes]
rs2958532	0.83[EUR][1000 genomes]
rs3018620	0.83[EUR][1000 genomes]
rs34075806	0.88[EUR][1000 genomes]
rs34114318	0.88[EUR][1000 genomes]
rs34853836	0.88[EUR][1000 genomes]
rs34950346	0.88[EUR][1000 genomes]
rs34956831	0.88[EUR][1000 genomes]
rs35015521	0.82[EUR][1000 genomes]
rs35341808	0.88[EUR][1000 genomes]
rs35499940	0.88[EUR][1000 genomes]
rs35737806	0.82[EUR][1000 genomes]
rs3741245	0.81[EUR][1000 genomes]
rs4281490	0.88[EUR][1000 genomes]
rs4432028	0.89[EUR][1000 genomes]
rs4963295	0.81[EUR][1000 genomes]
rs4963296	0.81[EUR][1000 genomes]
rs4963502	0.80[EUR][1000 genomes]
rs56142004	0.82[EUR][1000 genomes]
rs57066953	0.82[EUR][1000 genomes]
rs66605721	0.82[EUR][1000 genomes]
rs67149710	0.86[EUR][1000 genomes]
rs67821209	0.82[EUR][1000 genomes]
rs7109277	0.88[EUR][1000 genomes]
rs7111902	0.82[EUR][1000 genomes]
rs7116792	0.88[EUR][1000 genomes]
rs7118241	0.81[EUR][1000 genomes]
rs7128883	0.81[EUR][1000 genomes]
rs7130122	0.81[EUR][1000 genomes]
rs73494068	0.83[EUR][1000 genomes]
rs7928732	0.82[EUR][1000 genomes]
rs7929433	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7936165	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
SCGB1A1	Proximal transcriptional regulation
EEF1G	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)