SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 8)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1564278	0.90[YRI][hapmap]
rs3784713	0.90[YRI][hapmap]
rs3784716	0.88[ASW][hapmap];0.90[YRI][hapmap]
rs4776988	0.88[ASW][hapmap];0.90[YRI][hapmap]
rs4776989	0.88[ASW][hapmap];0.90[YRI][hapmap]
rs7171219	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];0.90[MEX][hapmap];0.93[MKK][hapmap];0.98[TSI][hapmap];0.95[YRI][hapmap];0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7183168	0.81[ASW][hapmap];0.90[YRI][hapmap]
rs8025526	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
MAP2K5	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 4)