SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 10)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1188017	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs477400	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs478294	0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4980502	0.81[AFR][1000 genomes]
rs513552	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs530399	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs540741	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs559116	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs562664	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs947843	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
RCOR2	Distal transcriptional regulation
MACROD1	RNA binding protein mediated regulation
ENSG00000256824	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)