SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11230796	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs198460	0.85[AFR][1000 genomes]
rs198461	0.86[YRI][hapmap];0.81[AFR][1000 genomes]
rs198462	0.80[YRI][hapmap]
rs198471	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs198472	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs198475	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs400075	0.94[EUR][1000 genomes]
rs695186	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000124915	Proximal transcriptional regulation
MYRF	Distal transcriptional regulation
MYRF	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)