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rVarBase
SNP Report
Basic Infomation
Name
rs1970506  
dbSNP
Location
chr:10,93428286
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 4)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10881934
0.94[CEU][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.93[EUR][1000 genomes]
rs10881935
0.95[CEU][hapmap];0.96[EUR][1000 genomes]
rs4933677
0.90[CEU][hapmap];0.87[EUR][1000 genomes]
rs7077656
0.87[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
GAPDHP28
Proximal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)