SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 13)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10748568	1.00[JPT][hapmap]
rs10786018	1.00[JPT][hapmap]
rs10881935	0.89[CEU][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10881957	1.00[JPT][hapmap]
rs10881959	1.00[JPT][hapmap]
rs1539041	1.00[JPT][hapmap]
rs1592051	1.00[JPT][hapmap]
rs1935030	1.00[JPT][hapmap]
rs1970506	0.94[CEU][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.93[EUR][1000 genomes]
rs2066276	1.00[JPT][hapmap]
rs4933677	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs6583787	1.00[JPT][hapmap]
rs7077656	0.93[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
PPP1R3C	Proximal transcriptional regulation
HECTD2	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)