SNP Report

Basic Infomation

Name	rs1815651 dbSNP
Location	chr:10,82157446
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 77)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1047952	0.86[ASN][1000 genomes]
rs10736342	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10749550	0.81[ASN][1000 genomes]
rs10749551	0.86[ASN][1000 genomes]
rs10749560	0.86[ASN][1000 genomes]
rs10749562	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10749569	0.86[ASN][1000 genomes]
rs10749595	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10788545	0.81[ASN][1000 genomes]
rs10788546	0.81[ASN][1000 genomes]
rs10788576	0.86[ASN][1000 genomes]
rs10788586	0.86[ASN][1000 genomes]
rs10887711	0.81[ASN][1000 genomes]
rs10887838	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1143694	0.81[ASN][1000 genomes]
rs12253992	0.86[EUR][1000 genomes]
rs1340374	0.86[ASN][1000 genomes]
rs1340375	0.86[ASN][1000 genomes]
rs1340376	0.86[ASN][1000 genomes]
rs1340379	0.86[ASN][1000 genomes]
rs1340380	0.86[ASN][1000 genomes]
rs1340384	0.86[ASN][1000 genomes]
rs1361458	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1417221	0.86[ASN][1000 genomes]
rs1538819	0.86[ASN][1000 genomes]
rs1572819	0.86[ASN][1000 genomes]
rs1815650	0.87[EUR][1000 genomes]
rs1870142	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1890578	0.86[ASN][1000 genomes]
rs1890889	0.86[ASN][1000 genomes]
rs1890890	0.86[ASN][1000 genomes]
rs1934692	0.86[ASN][1000 genomes]
rs1934693	0.86[ASN][1000 genomes]
rs1934694	0.86[ASN][1000 genomes]
rs1934695	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1934696	0.86[ASN][1000 genomes]
rs1972370	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1972371	0.86[ASN][1000 genomes]
rs2050824	0.86[ASN][1000 genomes]
rs2185426	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2185427	0.86[ASN][1000 genomes]
rs2282367	0.81[ASN][1000 genomes]
rs2342812	0.81[ASN][1000 genomes]
rs2342813	0.86[ASN][1000 genomes]
rs3802637	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3802638	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4258322	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4468295	0.86[ASN][1000 genomes]
rs4515913	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4536152	0.86[ASN][1000 genomes]
rs4601708	0.86[ASN][1000 genomes]
rs4934038	0.86[ASN][1000 genomes]
rs4934083	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4934084	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4934139	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4934153	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6585944	0.86[ASN][1000 genomes]
rs6585946	0.86[ASN][1000 genomes]
rs6585947	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6585986	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7077854	0.86[ASN][1000 genomes]
rs7078075	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7081889	0.85[EUR][1000 genomes]
rs7082102	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7082705	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7089003	0.86[ASN][1000 genomes]
rs7092237	0.85[EUR][1000 genomes]
rs7098045	0.86[ASN][1000 genomes]
rs756208	0.81[ASN][1000 genomes]
rs7899791	0.86[ASN][1000 genomes]
rs7903701	0.86[ASN][1000 genomes]
rs873395	0.81[ASN][1000 genomes]
rs9285726	0.81[ASN][1000 genomes]
rs9420349	0.81[ASN][1000 genomes]
rs9420359	0.86[ASN][1000 genomes]
rs9421464	0.81[ASN][1000 genomes]
rs946892	0.86[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
FAM213A	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)