SNP Report
| Name | rs1784221   dbSNP |
|---|---|
| Location | chr:11,65305868 |
| Allele | C/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs1152621 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs1152622 | 1.00[AMR][1000 genomes] |
| rs11823327 | 1.00[EUR][1000 genomes] |
| rs11826954 | 1.00[EUR][1000 genomes] |
| rs1194336 | 0.83[AMR][1000 genomes] |
| rs1194339 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs1784102 | 0.83[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs1939938 | 1.00[EUR][1000 genomes] |
| rs2307266 | 1.00[EUR][1000 genomes] |
| rs4149823 | 1.00[EUR][1000 genomes] |
| rs4149824 | 1.00[EUR][1000 genomes] |
| rs4149828 | 1.00[EUR][1000 genomes] |
| rs4149835 | 1.00[EUR][1000 genomes] |
| rs4149839 | 1.00[EUR][1000 genomes] |
| rs4647581 | 1.00[EUR][1000 genomes] |
| rs4647583 | 1.00[EUR][1000 genomes] |
| rs4647585 | 1.00[EUR][1000 genomes] |
| rs4647598 | 1.00[EUR][1000 genomes] |
| rs58771438 | 1.00[EUR][1000 genomes] |
| rs59598510 | 1.00[EUR][1000 genomes] |
| rs60315122 | 1.00[EUR][1000 genomes] |
| rs61072220 | 1.00[EUR][1000 genomes] |
| rs61502141 | 1.00[EUR][1000 genomes] |
| rs73482220 | 1.00[EUR][1000 genomes] |
| rs73482233 | 1.00[EUR][1000 genomes] |
| rs73482248 | 1.00[EUR][1000 genomes] |
| rs73482250 | 1.00[EUR][1000 genomes] |
| rs73482254 | 1.00[EUR][1000 genomes] |
| rs73482257 | 1.00[EUR][1000 genomes] |
| rs73482268 | 1.00[EUR][1000 genomes] |
| rs73484340 | 1.00[EUR][1000 genomes] |
| rs73484344 | 1.00[EUR][1000 genomes] |
| rs73484345 | 1.00[EUR][1000 genomes] |
| Symbol | Regulation type |
|---|---|
| SCYL1 | Proximal transcriptional regulation |
| NEAT1 | Distal transcriptional regulation |
| MALAT1 | Distal transcriptional regulation |
| SCYL1 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014




