SNP Report

Basic Infomation

Name	rs1152622 dbSNP
Location	chr:11,65274368
Allele	C/G

LD-proxy of rSNPs(r²>0.8) (count: 5)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1152621	1.00[AMR][1000 genomes]
rs1194336	0.83[AMR][1000 genomes]
rs1194339	1.00[AMR][1000 genomes]
rs1784102	0.83[AMR][1000 genomes]
rs1784221	1.00[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
PRPF38B	Distal transcriptional regulation
NDUFS2	Distal transcriptional regulation
STAT6	Distal transcriptional regulation
DIAPH3	Distal transcriptional regulation
ING1	Distal transcriptional regulation
IPO5	Distal transcriptional regulation
GTF2A2	Distal transcriptional regulation
HERPUD1	Distal transcriptional regulation
SRCAP	Distal transcriptional regulation
ENSG00000263004	Distal transcriptional regulation
AKAP1	Distal transcriptional regulation
ZFP36	Distal transcriptional regulation
PTBP1	Distal transcriptional regulation
PTMA	Distal transcriptional regulation
ENSG00000269363	Distal transcriptional regulation
RANBP2	Distal transcriptional regulation
ZFAS1	Distal transcriptional regulation
SNORD12C	Distal transcriptional regulation
ENSG00000242622	Distal transcriptional regulation
ACY1	Distal transcriptional regulation
ABHD14B	Distal transcriptional regulation
ATG10	Distal transcriptional regulation
HIST1H2APS4	Distal transcriptional regulation
HIST1H2BI	Distal transcriptional regulation
HIST1H2BD	Distal transcriptional regulation
EEF1A1	Distal transcriptional regulation
WDR13	Distal transcriptional regulation
NXF1	Distal transcriptional regulation
RCC1	Distal transcriptional regulation
ZNF783	Distal transcriptional regulation
TOB1	Distal transcriptional regulation
TOB1-AS1	Distal transcriptional regulation
TUBB	Distal transcriptional regulation
SECISBP2	Distal transcriptional regulation
ENSG00000188825	Distal transcriptional regulation
FAU	Distal transcriptional regulation
MRPL49	Distal transcriptional regulation
ENSG00000260233	Distal transcriptional regulation
SSSCA1	Distal transcriptional regulation
FAM89B	Distal transcriptional regulation
MAP3K11	Distal transcriptional regulation
PCNXL3	Distal transcriptional regulation
CATSPER1	Distal transcriptional regulation
EHBP1L1	Distal transcriptional regulation
SCYL1	Distal transcriptional regulation
LTBP3	Distal transcriptional regulation
RNU5E-1	Distal transcriptional regulation
HIST2H2BE	Distal transcriptional regulation
HIST2H2AC	Distal transcriptional regulation
ENSG00000229953	Distal transcriptional regulation
PARP1	Distal transcriptional regulation
HIST1H4I	Distal transcriptional regulation
SNORA43	Distal transcriptional regulation
SNHG7	Distal transcriptional regulation
SNORA17	Distal transcriptional regulation
ENSG00000222894	Distal transcriptional regulation
HIST1H3B	Distal transcriptional regulation
HIST1H2AB	Distal transcriptional regulation
ENSG00000212195	Distal transcriptional regulation
TIGD3	Distal transcriptional regulation
ENSG00000255478	Distal transcriptional regulation
SLC25A45	Distal transcriptional regulation
FRMD8	Distal transcriptional regulation
NEAT1	Distal transcriptional regulation
MIR612	Distal transcriptional regulation
ZMYND8	Distal transcriptional regulation
ENSG00000231119	Distal transcriptional regulation
POLA2	Distal transcriptional regulation
SEMA3C	Distal transcriptional regulation
CCDC88B	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)