SNP Report
Basic Infomation
| Name | rs17484093 dbSNP |
|---|---|
| Location | chr:12,40627652 |
| Allele | G/T |
LD-proxy of rSNPs(r2>0.8) (count: 16)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs17442283 | 0.91[CHB][hapmap] |
| rs17443234 | 0.91[CHB][hapmap] |
| rs17444075 | 0.91[CHB][hapmap] |
| rs17458100 | 0.91[CHB][hapmap] |
| rs17458452 | 0.91[CHB][hapmap] |
| rs17466009 | 0.91[CHB][hapmap] |
| rs17466227 | 0.91[CHB][hapmap] |
| rs17466444 | 0.91[CHB][hapmap] |
| rs17467046 | 0.80[CHB][hapmap] |
| rs17489542 | 0.91[CHB][hapmap] |
| rs17490692 | 0.91[CHB][hapmap] |
| rs17490928 | 0.91[CHB][hapmap] |
| rs17492173 | 0.91[CHB][hapmap] |
| rs17518134 | 0.91[CHB][hapmap] |
| rs28365208 | 0.91[CHB][hapmap] |
| rs28365241 | 0.91[CHB][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| LRRK2 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014