SNP Report

Basic Infomation

Name	rs17464657 dbSNP
Location	chr:20,44725488
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 28)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10485438	0.83[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs11086996	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12480077	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12480308	0.87[EUR][1000 genomes]
rs12480309	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs16991058	0.86[EUR][1000 genomes]
rs17450969	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17463884	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1950174	0.86[AFR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2206892	0.88[AFR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs35072483	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4410344	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4410345	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4414741	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4578917	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4810484	0.86[AFR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs55947855	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6032637	0.82[EUR][1000 genomes]
rs6032638	0.83[EUR][1000 genomes]
rs62215581	0.86[AFR][1000 genomes];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs62215583	0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs62215598	0.86[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs62215600	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs62215604	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7266662	0.86[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs7271670	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7273914	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs8125495	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
RPL13P2	Proximal transcriptional regulation
NCOA5	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)