SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 13)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs174572	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs174573	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs174575	0.87[CEU][hapmap];0.89[CHB][hapmap];0.88[JPT][hapmap];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs174579	0.86[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs174582	0.88[ASN][1000 genomes]
rs174585	1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs174587	0.90[ASN][1000 genomes]
rs174589	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs174590	0.81[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs174593	1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs174595	0.93[ASN][1000 genomes]
rs174597	1.00[CHB][hapmap];0.86[JPT][hapmap];0.91[ASN][1000 genomes]
rs93923	0.90[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
FADS2	Proximal transcriptional regulation
FADS2	Distal transcriptional regulation
FADS2	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)