SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 6)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11485864	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11488469	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4970438	0.82[AMR][1000 genomes]
rs4970440	0.94[AMR][1000 genomes]
rs4970443	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4970450	0.83[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CCNL2	Proximal transcriptional regulation
ENSG00000224870	Proximal transcriptional regulation
SLC16A1	Distal transcriptional regulation
ENSG00000226419	Distal transcriptional regulation
MIB2	Distal transcriptional regulation
SSU72	Distal transcriptional regulation
ENSG00000215014	Distal transcriptional regulation
ENSG00000225285	Distal transcriptional regulation
VWA1	Distal transcriptional regulation
ATAD3B	Distal transcriptional regulation
ANKRD65	Distal transcriptional regulation
ENSG00000225905	Distal transcriptional regulation
MXRA8	Distal transcriptional regulation
AURKAIP1	Distal transcriptional regulation
ATAD3A	Distal transcriptional regulation
C9orf169	Distal transcriptional regulation
RNF224	Distal transcriptional regulation
TMEM88B	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)