SNP Report

Basic Infomation

Name	rs17027071 dbSNP
Location	chr:2,103012674
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 47)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1035130	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10490203	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10490204	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11123927	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11123928	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11123929	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1135354	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11465633	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11678975	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11681718	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11683700	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11694360	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs17027037	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs17027060	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs17027166	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs17027179	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2080289	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2160202	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2270298	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2287034	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2287035	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs3732125	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs3732126	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs3771150	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs3771156	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs3771162	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs3771171	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs3771172	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs3821203	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4851006	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4851570	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4851582	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4851583	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4851585	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs55645612	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs55883125	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs56044378	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs56166614	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs56258475	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs56331791	0.95[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs56386507	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs66566526	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs66919607	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs67723747	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7597017	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs887971	0.86[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs887972	0.86[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
IL18R1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)