SNP Report
Name | rs17008881   dbSNP |
---|---|
Location | chr:2,61609926 |
Allele | T/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs1017584 | 0.88[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap];0.89[ASN][1000 genomes] |
rs1059541 | 0.85[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes] |
rs17007967 | 0.88[CEU][hapmap];0.82[CHB][hapmap];0.91[JPT][hapmap] |
rs1823685 | 0.94[CEU][hapmap];0.90[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes] |
rs2166720 | 0.88[CEU][hapmap];0.85[CHB][hapmap];0.90[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.88[ASN][1000 genomes] |
rs2839831 | 0.88[CEU][hapmap];0.91[CHB][hapmap];0.90[JPT][hapmap];0.84[ASN][1000 genomes] |
rs34606253 | 0.86[ASN][1000 genomes] |
rs57444330 | 0.85[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs72811450 | 1.00[AFR][1000 genomes] |
rs72811469 | 1.00[AFR][1000 genomes] |
rs72813503 | 1.00[AFR][1000 genomes] |
rs72813509 | 1.00[AFR][1000 genomes] |
rs72813523 | 0.89[AFR][1000 genomes] |
rs72813556 | 0.88[ASN][1000 genomes] |
rs72813558 | 0.86[ASN][1000 genomes] |
rs72813572 | 0.90[ASN][1000 genomes] |
rs72813592 | 0.89[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs7559099 | 0.88[CEU][hapmap];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs7564507 | 0.94[CEU][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes] |
rs778754 | 0.84[CEU][hapmap];1.00[YRI][hapmap] |
Symbol | Regulation type |
---|---|
USP34 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014