SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 6)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11642116	0.82[ASW][hapmap]
rs3826260	0.84[ASW][hapmap];0.82[CEU][hapmap]
rs4592664	1.00[ASW][hapmap];1.00[CEU][hapmap];0.94[CHB][hapmap];0.94[CHD][hapmap];0.93[GIH][hapmap];0.81[JPT][hapmap];0.94[MEX][hapmap];1.00[MKK][hapmap];0.90[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs60055466	0.80[AMR][1000 genomes]
rs66923906	0.82[AMR][1000 genomes]
rs67922443	0.80[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
PRKCB	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 2)

eQTL related gene	Source
PRKCB	seeQTL
ACSM5	SCAN