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rVarBase
SNP Report
Basic Infomation
Name
rs1690499  
dbSNP
Location
chr:16,11381956
Allele
T/C
LD-proxy of rSNPs(r
2
>0.8) (count: 14)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11074957
0.84[EUR][1000 genomes]
rs11640295
0.83[EUR][1000 genomes]
rs12447592
0.84[EUR][1000 genomes]
rs1559394
0.84[EUR][1000 genomes]
rs2070923
0.84[EUR][1000 genomes]
rs2550475
0.84[EUR][1000 genomes]
rs28567501
0.86[EUR][1000 genomes]
rs34764020
0.85[EUR][1000 genomes]
rs376374
0.84[EUR][1000 genomes]
rs4781057
0.85[EUR][1000 genomes]
rs4781059
0.82[EUR][1000 genomes]
rs686774
0.82[EUR][1000 genomes]
rs737008
0.81[EUR][1000 genomes]
rs949429
0.83[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
RMI2
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)