SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 17)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1404401	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1408870	0.98[ASN][1000 genomes]
rs16847960	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs16847970	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs16847977	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16847981	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55643427	1.00[ASN][1000 genomes]
rs56799079	0.93[ASN][1000 genomes]
rs60914997	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs61819514	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61819516	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6666862	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6671774	0.81[ASN][1000 genomes]
rs74136339	1.00[ASN][1000 genomes]
rs74136341	1.00[ASN][1000 genomes]
rs74136342	1.00[ASN][1000 genomes]
rs9988426	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
IGFN1	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)