SNP Report
Name | rs1516579   dbSNP |
---|---|
Location | chr:20,44407144 |
Allele | A/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs11537645 | 0.94[ASN][1000 genomes] |
rs16990631 | 1.00[CEU][hapmap] |
rs16990761 | 1.00[CEU][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs16990793 | 0.94[ASN][1000 genomes] |
rs2868348 | 0.94[ASN][1000 genomes] |
rs41282762 | 0.86[EUR][1000 genomes] |
rs41282768 | 0.83[EUR][1000 genomes] |
rs45549239 | 0.86[EUR][1000 genomes] |
rs4812964 | 0.94[ASN][1000 genomes] |
rs4812965 | 0.82[ASN][1000 genomes] |
rs55794417 | 0.83[EUR][1000 genomes] |
rs56235529 | 0.90[AMR][1000 genomes];0.90[ASN][1000 genomes] |
rs56948489 | 0.94[ASN][1000 genomes] |
rs59035785 | 0.98[ASN][1000 genomes] |
rs59673641 | 0.82[ASN][1000 genomes] |
rs59707569 | 0.94[ASN][1000 genomes] |
rs6514062 | 0.94[ASN][1000 genomes] |
rs6514063 | 0.94[ASN][1000 genomes] |
rs66628061 | 0.92[EUR][1000 genomes] |
rs66701110 | 0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs67571923 | 0.89[EUR][1000 genomes] |
rs7260934 | 0.81[EUR][1000 genomes] |
rs73120855 | 0.92[EUR][1000 genomes] |
rs73122716 | 0.92[EUR][1000 genomes] |
rs73122729 | 0.92[EUR][1000 genomes] |
rs73122731 | 0.92[EUR][1000 genomes] |
rs73122735 | 0.86[EUR][1000 genomes] |
rs73122739 | 0.86[EUR][1000 genomes] |
rs73122754 | 0.86[EUR][1000 genomes] |
rs73122763 | 0.86[EUR][1000 genomes] |
rs73122768 | 0.89[EUR][1000 genomes] |
rs73306407 | 0.92[ASN][1000 genomes] |
rs73306423 | 0.98[ASN][1000 genomes] |
rs73306458 | 0.98[ASN][1000 genomes] |
rs73306487 | 0.94[ASN][1000 genomes] |
rs800684 | 0.98[ASN][1000 genomes] |
rs8115525 | 0.98[ASN][1000 genomes] |
rs8118462 | 0.83[EUR][1000 genomes] |
Symbol | Regulation type |
---|---|
ENSG00000221046 | Proximal transcriptional regulation |
WFDC3 | Distal transcriptional regulation |
DNTTIP1 | Distal transcriptional regulation |
ZSWIM1 | Distal transcriptional regulation |
SDC4 | Distal transcriptional regulation |
PCIF1 | Distal transcriptional regulation |
UBE2C | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014