SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11886877	0.85[CEU][hapmap];0.93[CHB][hapmap];0.83[EUR][1000 genomes]
rs2230400	1.00[YRI][hapmap]
rs2310169	0.91[CEU][hapmap];0.93[CHB][hapmap];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs28564761	0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs28595151	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs28600315	0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs28688254	0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3218977	0.86[YRI][hapmap]
rs33987946	0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4851520	0.92[CEU][hapmap];0.93[CHB][hapmap];0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4851522	1.00[CEU][hapmap];0.92[CHB][hapmap];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
IL1R2	Proximal transcriptional regulation
IL1R2	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)