SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs13408303	0.85[CEU][hapmap];0.93[CHB][hapmap];0.83[EUR][1000 genomes]
rs2310169	1.00[CHB][hapmap];0.85[ASN][1000 genomes]
rs2310170	0.80[YRI][hapmap]
rs28564761	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs28595151	0.85[ASN][1000 genomes]
rs28600315	0.85[ASN][1000 genomes]
rs28688254	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs33987946	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4851520	0.92[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4851522	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7561191	0.80[YRI][hapmap]
rs7570441	0.80[YRI][hapmap]

rSNP related genes

Symbol	Regulation type
IL1R2	Proximal transcriptional regulation
IL1R2	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 1)