SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 13)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10483815	0.88[CEU][hapmap]
rs10483817	0.94[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12435141	0.92[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12435831	0.90[CEU][hapmap];0.83[EUR][1000 genomes]
rs12437314	0.90[CEU][hapmap];0.83[EUR][1000 genomes]
rs12890235	0.88[CEU][hapmap]
rs17756782	0.90[CEU][hapmap];0.81[EUR][1000 genomes]
rs2273486	0.90[CEU][hapmap]
rs4902627	0.82[EUR][1000 genomes]
rs8006682	0.82[EUR][1000 genomes]
rs8010235	0.84[CEU][hapmap]
rs8016988	0.95[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8023214	0.90[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
ZFP36L1	Distal transcriptional regulation
RAD51B	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)