SNP Report
Basic Infomation
| Name | rs12435141 dbSNP |
|---|---|
| Location | chr:14,69109381 |
| Allele | T/A |
LD-proxy of rSNPs(r2>0.8) (count: 14)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10483815 | 0.91[CEU][hapmap] |
| rs10483817 | 0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes] |
| rs12435831 | 0.83[CEU][hapmap];0.87[EUR][1000 genomes] |
| rs12436964 | 1.00[YRI][hapmap];0.96[AFR][1000 genomes] |
| rs12437314 | 0.83[CEU][hapmap];0.87[EUR][1000 genomes] |
| rs12890235 | 0.91[CEU][hapmap] |
| rs12890882 | 0.92[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs17756782 | 0.83[CEU][hapmap];0.85[EUR][1000 genomes] |
| rs2273486 | 0.92[CEU][hapmap] |
| rs4902627 | 0.86[EUR][1000 genomes] |
| rs8006682 | 0.86[EUR][1000 genomes] |
| rs8010235 | 0.83[CEU][hapmap] |
| rs8016988 | 0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes] |
| rs8023214 | 0.90[JPT][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| RAD51B | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014