SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12790169	0.95[CEU][hapmap];1.00[YRI][hapmap];0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs17706767	1.00[ASW][hapmap];1.00[CEU][hapmap];0.92[GIH][hapmap];0.90[MKK][hapmap];0.93[TSI][hapmap];1.00[YRI][hapmap];0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2203171	0.83[EUR][1000 genomes]
rs34867475	0.89[ASN][1000 genomes]
rs34916493	0.83[ASN][1000 genomes]
rs35124768	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35148106	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs35822010	0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs55783246	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
FTH1	Distal transcriptional regulation
ENSG00000269089	Distal transcriptional regulation
ENSG00000244176	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 4)