SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12720279	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12720299	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12720326	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs203999	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs280500	1.00[CHB][hapmap]
rs280501	1.00[CHB][hapmap]
rs280502	1.00[CHB][hapmap]
rs280521	1.00[CHB][hapmap];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4804505	1.00[CHB][hapmap]

rSNP related genes

Symbol	Regulation type
TYK2	Proximal transcriptional regulation
TYK2	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)