SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 10)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10083069	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs10160974	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11168879	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12299500	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12303622	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12308393	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12315499	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12318545	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12321116	0.93[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs61730859	1.00[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
LMBR1L	Distal transcriptional regulation
TUBA1B	Distal transcriptional regulation
ENSG00000258017	Distal transcriptional regulation
ENSG00000200309	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)