SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10083069	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10160974	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12299500	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12303622	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12305752	1.00[AMR][1000 genomes]
rs12308393	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12315499	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12317546	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12318545	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12321116	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61730859	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7342336	1.00[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
LMBR1L	Distal transcriptional regulation
ENSG00000258101	Distal transcriptional regulation
TUBA1C	Distal transcriptional regulation
TUBA1B	Distal transcriptional regulation
ENSG00000258017	Distal transcriptional regulation
ENSG00000200309	Distal transcriptional regulation
TUBA1A	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)