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rVarBase
SNP Report
Basic Infomation
Name
rs12308447  
dbSNP
Location
chr:12,40559034
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 16)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11174688
0.83[YRI][hapmap]
rs11175139
0.84[YRI][hapmap]
rs11175629
0.84[YRI][hapmap]
rs11175659
0.82[AFR][1000 genomes]
rs11175663
0.84[YRI][hapmap]
rs12296596
1.00[YRI][hapmap];0.97[AFR][1000 genomes]
rs12300008
0.84[YRI][hapmap]
rs12304648
0.86[AFR][1000 genomes]
rs12307850
1.00[YRI][hapmap];0.86[AFR][1000 genomes]
rs12313568
0.84[YRI][hapmap]
rs12314745
0.84[YRI][hapmap]
rs17489951
0.86[AFR][1000 genomes]
rs28370644
0.84[YRI][hapmap]
rs7132755
0.84[YRI][hapmap]
rs7135556
0.86[AFR][1000 genomes]
rs7309328
0.83[YRI][hapmap]
rSNP related genes
Symbol
Regulation type
ENSG00000223914
Proximal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)