SNP Report
Name | rs12296596   dbSNP |
---|---|
Location | chr:12,40590181 |
Allele | G/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs11174688 | 0.83[YRI][hapmap] |
rs11175139 | 0.83[YRI][hapmap] |
rs11175629 | 0.83[YRI][hapmap];0.81[AFR][1000 genomes] |
rs11175659 | 0.85[AFR][1000 genomes] |
rs11175663 | 0.83[YRI][hapmap];0.81[AFR][1000 genomes] |
rs12300008 | 0.83[YRI][hapmap] |
rs12304648 | 0.88[AFR][1000 genomes] |
rs12307850 | 1.00[ASW][hapmap];1.00[YRI][hapmap];0.83[AFR][1000 genomes] |
rs12308447 | 1.00[YRI][hapmap];0.97[AFR][1000 genomes] |
rs12313568 | 0.83[YRI][hapmap] |
rs12314745 | 0.83[YRI][hapmap] |
rs17489951 | 0.83[AFR][1000 genomes] |
rs28370644 | 0.83[YRI][hapmap] |
rs7132755 | 0.83[YRI][hapmap] |
rs7135556 | 0.88[AFR][1000 genomes] |
rs7135747 | 1.00[MKK][hapmap] |
Symbol | Regulation type |
---|---|
LRRK2 | Proximal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014