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rVarBase
SNP Report
Basic Infomation
Name
rs12281060  
dbSNP
Location
chr:11,60820095
Allele
T/A
LD-proxy of rSNPs(r
2
>0.8) (count: 4)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs175102
1.00[CHB][hapmap];0.94[JPT][hapmap];0.87[ASN][1000 genomes]
rs4938994
0.83[EUR][1000 genomes]
rs4939493
0.94[CEU][hapmap];0.83[EUR][1000 genomes]
rs599856
0.93[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
ENSG00000256733
Proximal transcriptional regulation
PRPF19
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)