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rVarBase
SNP Report
Basic Infomation
Name
rs12279247  
dbSNP
Location
chr:11,64928988
Allele
A/G
LD-proxy of rSNPs(r
2
>0.8) (count: 14)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs12271615
0.95[AFR][1000 genomes]
rs12280476
0.87[AFR][1000 genomes]
rs12282348
1.00[AMR][1000 genomes]
rs12285030
0.87[AFR][1000 genomes]
rs12288247
0.87[AFR][1000 genomes]
rs12291307
0.84[AFR][1000 genomes]
rs35983251
0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs3782095
0.87[AFR][1000 genomes]
rs56368078
1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57731342
1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7110646
0.89[AFR][1000 genomes]
rs7926131
1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7935441
0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7936473
0.82[AFR][1000 genomes]
rSNP related genes
Symbol
Regulation type
ENSG00000255058
Proximal transcriptional regulation
SYVN1
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)