SNP Report

Basic Infomation

Name	rs12251970 dbSNP
Location	chr:10,59971818
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 27)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10047265	1.00[YRI][hapmap]
rs10509088	1.00[CEU][hapmap];0.82[JPT][hapmap];1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11006087	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11006092	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11006098	1.00[YRI][hapmap]
rs11006113	1.00[YRI][hapmap]
rs12241783	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap];0.94[EUR][1000 genomes]
rs12241885	1.00[YRI][hapmap]
rs12255735	1.00[CEU][hapmap];0.85[CHB][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12259128	1.00[YRI][hapmap]
rs12261547	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12262648	1.00[YRI][hapmap]
rs12268026	1.00[YRI][hapmap]
rs12570088	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12572236	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12572520	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1625716	0.97[ASN][1000 genomes]
rs16912153	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs2275442	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap];0.94[EUR][1000 genomes]
rs3758567	0.94[EUR][1000 genomes]
rs58375950	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60679872	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61873887	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs61873953	0.85[EUR][1000 genomes]
rs61875332	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61875333	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7900114	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CISD1	Distal transcriptional regulation
IPMK	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)