SNP Report
Name | rs12199271   dbSNP |
---|---|
Location | chr:6,20751220 |
Allele | G/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10946405 | 0.88[ASN][1000 genomes] |
rs10946406 | 0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs12190376 | 0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs13214325 | 0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs2745929 | 0.92[ASN][1000 genomes] |
rs2819990 | 0.83[AMR][1000 genomes];0.89[ASN][1000 genomes] |
rs34801493 | 0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs4351239 | 0.90[ASN][1000 genomes] |
rs4475313 | 0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs4510656 | 0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs4644038 | 0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs4710945 | 0.85[ASN][1000 genomes] |
rs4710946 | 0.90[ASN][1000 genomes] |
rs4712539 | 0.80[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs4712540 | 0.90[ASN][1000 genomes] |
rs6910215 | 0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs6910326 | 0.90[ASN][1000 genomes] |
rs7453352 | 0.88[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs7747724 | 0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs7765413 | 0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs9356756 | 0.81[ASN][1000 genomes] |
rs9465877 | 0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs9465879 | 0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs9465880 | 0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs9465883 | 0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs9465888 | 0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs9465889 | 0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs9465890 | 0.86[ASN][1000 genomes] |
rs9465895 | 0.84[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
CDKAL1 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014